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LoadH5Seurat error after updating signac package

Crystalli2018 asked May 6, 2021 in Q&A · Answered

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integrate data from different conditions

AnneDi asked Mar 31, 2021 in Q&A · Answered

2
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Check for batch effect on data acquired with Rhapsody

algebio asked Apr 19, 2021 in Q&A · Answered

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How to get FeaturePlot data

Xiangruili-seed asked Apr 29, 2021 in Q&A · Answered

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Using batch corrected scRNA-seq data for integration with scATAC-seq data

RegnerM2015 asked Apr 22, 2021 in Q&A · Answered

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Trajectories with Monocle 3 and Seurat 4

jintaoxu07 asked Apr 22, 2021 in Q&A · Unanswered

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Gene order in SCT scale.data slot

K10308 asked Apr 16, 2021 in Q&A · Answered

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Using with full-length scRNA data?

f6v asked Apr 15, 2021 in Q&A · Answered

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5' and 3' GEX integration

tdfy asked Apr 2, 2021 in Q&A · Answered

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Batch correction using Harmony

abbaslab asked Apr 9, 2021 in Q&A · Answered

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Effects of integration on data that does not need to be integrated...

franziskadenk asked Apr 8, 2021 in Q&A · Unanswered

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Batch correction and Integration: For 2 conditions, 3 replicates(n=3).

dmsalsgh97 asked Apr 8, 2021 in Q&A · Unanswered

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Seurat workflows and compatibility with targeted gene panels

jhb1980 asked Mar 22, 2021 in Q&A · Answered

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Heatmap

pbpayal asked Mar 24, 2021 in Q&A · Answered

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Custom color scheme for spatial plot does not seem to work

smk5g5 asked Mar 25, 2021 in Q&A · Answered

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Weighted Nearest Neighbor Analysis for only 2 CITE-seq Abs

XinLi-0419 asked Mar 29, 2021 in Q&A · Answered

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Ways to regress cell cycle effect on RunfastMNN output

qoiopipq asked Mar 4, 2021 in Q&A · Answered

3
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Find Markers of Disease

cmarsac asked Mar 19, 2021 in Q&A · Answered

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How to cluster based on different Hashtags (HTO) ?

ahmadsam66 asked Mar 18, 2021 in Q&A · Answered

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What are the differences between vars.to.regress and latent.vars? Should I use both for a variable?

denvercal1234GitHub asked Mar 15, 2021 in Q&A · Answered

7
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Using existing clustering reference

vcglinnaeus asked Mar 15, 2021 in Q&A · Answered

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I cannot install Seurat package

alexandre-schaves asked Mar 16, 2021 in Q&A · Answered

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How to handle decimal values for nCount_RNA.

ksaunders73 asked Mar 14, 2021 in Q&A · Answered

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How to subset two distinct clouds of cells based on nFeatures and nCounts

CampbellClark1 asked Mar 3, 2021 in Q&A · Answered

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Spatially variable genes across multiple samples

franciscogrisanti asked Mar 10, 2021 in Q&A · Answered

3