Get

How to get

Your own Linux machine (Ubuntu 12-15; Fedora 22)

git clone https://github.com/sauloal/cnidaria

or

wget https://github.com/sauloal/cnidaria/archive/master.zip
unzip master.zip

or

curl -o master.zip https://github.com/sauloal/cnidaria/archive/master.zip
unzip master.zip

Docker

You can find the docker recipes at src/docker.

You can download Cnidaria on docker by running:

$ docker pull sauloal/cnidaria_full

To run Cnidaria on a folder called INPUT:

docker run -it --rm -v $PWD/INPUT/:/home/cnidaria/cnidaria/data sauloal/cnidaria_full bash

To verify:

$ pwd
/home/cnidaria/cnidaria
$ ls data
./ ../ YOUR_DATA

Once inside the VM, as long as you save it on the data/ folder, all files (result or configuration) will be permanent.

Files created outside the data/ folder will be deleted.

To leave the VM type 'exit'.

To install new programs use 'sudo'.

Username: cnidaria Password: cnidaria