0.18.x missing on github #5185
Comments
|
How does one fix this? 😂 |
|
I pushed two "releases" on github, v0.18.0 and v0.18.1. For v0.18.1, the content is somehow duplicated, but I guess it is ok. |
jni
added a commit
that referenced
this issue
Jan 19, 2021
rfezzani
added a commit
that referenced
this issue
Jan 22, 2021
* resize using scipy.ndimage.zoom * Clip negative values in output of RGB to HED conversion. Fixes #5164 * Fixed stain separation tests. - Round trips start with stains, such that the roundtrip does not require negative values. - Using a blue+red+orange stain combination, the test previously used a 2-stain combination that made it impossible to do a correct roundtrip. * Improve IHC stain separation example. * BENCH: add benchmarks for resize and rescale * move mode conversion code to _shared.utils.py use grid-constant and grid-wrap for SciPy >= 1.6.0 closes gh-5064 * separate grid mode conversion utility * Update doc/examples/color_exposure/plot_ihc_color_separation.py Improvement to the IHC example. Co-authored-by: Riadh Fezzani <rfezzani@gmail.com> * add TODO for removing legacy code paths * avoid pep8 warning in benchmark_interpolation.py * keep same ValueError on unrecognized modes * test_rank.py: fetch reference data once into a dictionary of arrays (#5175) This should avoid stochastic test failures that have been occuring on GitHub Actions * Add normalized mutual information metric (#5158) * Add normalized mutual information metric * Add tests for NMI * Add NMI to metrics init * Fix error message for incorrect target shape * Add 3D NMI test * properly add nmi to metrics init * _true, _test -> 0, 1 * ravel -> reshape(-1) * Apply suggestions from @mkcor's code review Co-authored-by: Marianne Corvellec <marianne.corvellec@ens-lyon.org> * Fix warning and exception messages Co-authored-by: Marianne Corvellec <marianne.corvellec@ens-lyon.org> * segment Other section of TODO by date based on NEP-29 24 month window for dropping upstream package version * Fix bug in optical flow code and examples mode 'nearest' is a scipy.ndimage mode, but warp only accepts the numpy.pad equivalent of 'edge' * fix additional cases of warp with 'nearest'->'edge' * DOC: Fixup to linspace in example (#5181) Right now the data is not sampled every half degree. Also, -pi/2 to pi/2. * Minor fixups to Hough line transform code and examples (#5182) * Correction to linspace call in hough_line default `theta = np.pi / 2 - np.arange(180) / 180.0 * np.pi` done correctly below. * BUG: Fixup to image orientation in example * DOC: Tiny typo * Changed range to conform to documentation The original was [pi/2, -pi/2), not [-pi/2, pi/2). Updated wording in docs. * Fixed x-bounds of hough image in example * Fixed long line * Fixes to tests Number of lines in checkerboard, longer line in peak ordering assertion, updated angle * Accidentally modified the wrong value. * Updated example to include three lines As requested in review * Fixed off-by one error in pixel bins in hough line transform (#5183) * Added 1/2 pixel bounds to extent of displayed images (#5184) * fast, non-Cython implementation for correlate_sparse (#5171) * Replace correlate_sparse Cython version with a simple slicing-based variant in _mean_std This slicing variant has two benefits: 1.) profiled 30-40% faster on 2d and 3d cases I tested with 2.) can immediately be used by other array backends such as CuPy * remove intermediate padded_sq variable to reduce memory footprint * Update skimage/filters/_sparse.py remove duplicate declarations Co-authored-by: Riadh Fezzani <rfezzani@gmail.com> * move _to_np_mode and _to_ndimage_mode to _shared.utils.py * add comment about corner_index needing to be present * raise RuntimeError on missing corner index * update code style based on reviewer comments Co-authored-by: Riadh Fezzani <rfezzani@gmail.com> * Add release step on github to RELEASE.txt (See #5185) (#5187) Co-authored-by: Juan Nunez-Iglesias <juan.nunez-iglesias@monash.edu> * Prevent integer overflow in EllipseModel (#5179) * Change dtype of CircleModel and EllipseModel to float, to avoid integer overflows * remove failing test and add code review notes * Apply suggestions from code review Co-authored-by: Stefan van der Walt <sjvdwalt@gmail.com> * Remove unused pytest import Co-authored-by: Stefan van der Walt <sjvdwalt@gmail.com> Co-authored-by: Stefan van der Walt <sjvdwalt@gmail.com> Co-authored-by: Juan Nunez-Iglesias <juan.nunez-iglesias@monash.edu> * Add saturation parameter to color.label2rgb (#5156) * Remove reference to opencv in threshold_local documentation (#5191) Co-authored-by: Marianne Corvellec <marianne.corvellec@ens-lyon.org> Co-authored-by: Riadh <r.fezzani@vitadx.com> * resize using scipy.ndimage.zoom * BENCH: add benchmarks for resize and rescale * move mode conversion code to _shared.utils.py use grid-constant and grid-wrap for SciPy >= 1.6.0 closes gh-5064 * separate grid mode conversion utility * add TODO for removing legacy code paths * avoid pep8 warning in benchmark_interpolation.py * keep same ValueError on unrecognized modes * segment Other section of TODO by date based on NEP-29 24 month window for dropping upstream package version * Fix bug in optical flow code and examples mode 'nearest' is a scipy.ndimage mode, but warp only accepts the numpy.pad equivalent of 'edge' * fix additional cases of warp with 'nearest'->'edge' * Apply suggestions from code review Co-authored-by: Riadh Fezzani <rfezzani@gmail.com> Co-authored-by: Cris Luengo <cris.l.luengo@gmail.com> Co-authored-by: Cris Luengo <crisluengo@users.noreply.github.com> Co-authored-by: Riadh Fezzani <rfezzani@gmail.com> Co-authored-by: Alexandre de Siqueira <alex.desiqueira@igdore.org> Co-authored-by: Juan Nunez-Iglesias <juan.nunez-iglesias@monash.edu> Co-authored-by: Marianne Corvellec <marianne.corvellec@ens-lyon.org> Co-authored-by: Joseph Fox-Rabinovitz <madphysicist@users.noreply.github.com> Co-authored-by: François Boulogne <fboulogne@sciunto.org> Co-authored-by: Mark Boer <m.h.boer.2@gmail.com> Co-authored-by: Stefan van der Walt <sjvdwalt@gmail.com> Co-authored-by: Carlos Andrés Álvarez Restrepo <charlie_cha@outlook.com> Co-authored-by: Riadh <r.fezzani@vitadx.com>
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Description
See https://github.com/scikit-image/scikit-image/releases :)
The text was updated successfully, but these errors were encountered: