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Devel #168

Merged
merged 19 commits into from
Feb 6, 2023
Merged

Devel #168

merged 19 commits into from
Feb 6, 2023

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MohamadHarastani
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@MohamadHarastani
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@mms29 I tested the installation on a new computer and it worked like a charm.
I cannot test since Xmipp deprecated some programs. Xmipp master doesn't compile for me, so I will try to recover the deprecated programs and test again.
In the meantime, if you have anything to add its the time.

@MohamadHarastani
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Something is a little too verbose during the tests

> Reading pdb file /mnt/data1/shared/scipion3/data/tests/nma_V2.0/genesis/1ake.pdb ...
	 Done 

> Reading pdb file Runs/000669_FlexProtGenesis/extra/inputPDB_000001.pdb ...
	 Done 

> Reading pdb file Runs/000669_FlexProtGenesis/extra/output_000001_remd1.pdb ...
	 Done 

> Reading pdb file Runs/000669_FlexProtGenesis/extra/output_000001_remd2.pdb ...
	 Done 

> Matching PDBs atoms ...
Chains list 1  : ['A']
Chains list 1  : ['A']
Number of match : 1
Seg list 1  : ['P0']
Seg list 1  : ['P0']
Number of match : 0
	 Matching chains 1 ... 
	 211 matching atoms 
	 Done
> Aligning PDB ...
	 Done 

> Aligning PDB ...
	 Done 

> Aligning PDB ...
	 Done 

@MohamadHarastani
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I recovered the deprecated files in Xmipp, you can checkout this branch and run it.
I2PC/xmipp#707

Something like this

./xmipp get_devel_sources devel
git checkout mh_undeprecate
scipion3 run ./xmipp

@MohamadHarastani
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All tests work for me! It's time to release :-)

@mms29
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mms29 commented Feb 6, 2023 via email

@MohamadHarastani
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Done! Enjoy the conference.

@MohamadHarastani MohamadHarastani merged commit 0b70f26 into master Feb 6, 2023
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2 participants