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Compression of collections #28

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PlatonB opened this issue Feb 11, 2022 · 2 comments
Open

Compression of collections #28

PlatonB opened this issue Feb 11, 2022 · 2 comments

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@PlatonB
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PlatonB commented Feb 11, 2022

It is not clear whether collections are compressed. If so, what algorithm is used by default? Can the user specify a preferred algorithm and compression level?

An example from the MongoDB world:
create_collection(name, storageEngine={'wiredTiger': {'configString': 'block_compressor=zstd'}})

@scottrogowski
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Collections are not compressed in any way right now. Is this an essential use case for you or a nice-to-have?

@PlatonB
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PlatonB commented Feb 17, 2022

Compression is critical when storing large bioinformatic data (example 1, example 2, ..., in-house laboratory genomic data). I am sure that in other fields (e.g., astronomy) there are examples too.

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