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How to obtain more top_non_dropout_de? #57

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yanwuanxin opened this issue Mar 15, 2024 · 2 comments
Closed

How to obtain more top_non_dropout_de? #57

yanwuanxin opened this issue Mar 15, 2024 · 2 comments

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@yanwuanxin
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image

adata.uns["top_non_dropout_de_20"] stored top20 differential gene, how to get more?

@yanwuanxin
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modifying script of data_utils.py to get more top_non_dropout_de, but the result of top20 and top50 are inconsistent.

modify the script as follows:
image

top20 result:
ddfd390d4ea23f3e3864ab8117654b0

top50 result:
7f604ccb98cded6be55919a01cc64e5

@ceesu
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ceesu commented Sep 4, 2024

There is an example notebook on their paper's GitHub.

@yhr91 yhr91 closed this as completed Oct 14, 2024
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