paper stuff

paper.json

@@ -0,0 +1,17 @@
+{
+  "@context": "https://raw.githubusercontent.com/mbjones/codemeta/master/codemeta.jsonld",
+  "@type": "Code",
+  "author": [
+
+  ],
+  "identifier": "",
+  "codeRepository": "https://github.com/dib-lab/sourmash",
+  "datePublished": "2016-06-07",
+  "dateModified": "2016-06-07",
+  "dateCreated": "2016-06-07",
+  "description": "Generate, compare, and manipulate MinHash sketches of genomic data",
+  "keywords": "MinHash, k-mers, Python",
+  "license": "BSD 3-clause",
+  "title": "sourmash",
+  "version": "v1.0.0"
+}

paper.md

@@ -0,0 +1,32 @@
+---
+title: 'sourmash: a library for MinHash sketching of DNA'
+tags:
+  - MinHash
+  - k-mers
+  - Python
+authors:
+ - name: C. Titus Brown
+   orcid: 0000-0001-6001-2677
+   affiliation: University of California, Davis
+ - name: Luiz Irber
+   orcid: 0000-0003-4371-9659
+   affiliation: University of California, Davis
+date: 6 June 2016
+bibliography: paper.bib
+---
+
+# Summary
+
+sourmash is a toolbox for creating, comparing, and manipulating MinHash
+sketches of genomic data.
+
+MinHash sketches provide a lightweight way to store "signatures" of
+large DNA or RNA sequence collections, and then compare or search them
+using a Jaccard index.  MinHash sketches can be used to identify samples,
+find similar samples, identify data sets with shared sequences, and
+build phylogenetic trees. [@mash]
+
+sourmash provides a command line script, a Python library, and a CPython
+module for MinHash sketches.
+
+# References