basic directory structure

stephenslab · Oct 26, 2015 · e1c86dd · e1c86dd
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diff --git a/.gitignore b/.gitignore
@@ -3,4 +3,5 @@ docs/*.log
 output/
 packrat/lib*/
 .Rprofile
+.Rhistory
 .Rproj.user
diff --git a/Makefile b/Makefile
diff --git a/README.md b/README.md
@@ -0,0 +1,7 @@
+- analysis: Rmd files for investigations; will generate figures in figure/ subdirectory
+- R: R scripts/functions used in analysis; no code that is actually run put here
+- output: largish files of data, typically created by code (eg postprocessed data, simulations)
+- code: code used for preprocessing, generation of output files etc ; may be long-running
+- data: datasets that generally will not change once deposited
+- paper: the paper
+- talks: any presentations
diff --git a/ash-packrat.Rproj b/ash-packrat.Rproj
@@ -11,3 +11,5 @@ Encoding: UTF-8
 
 RnwWeave: knitr
 LaTeX: pdfLaTeX
+
+BuildType: Makefile