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If you're referring to ConfigProperty.class, property values can be encrypted by specifying PropertyType.ENCRYPTEDSTRING as the property type. Use DataEncryption.class for the actual encryption/decryption. At the moment, there isn't a class that does this for you automatically. However, Dependency-Track, an application built on top of Alpine, does have a JAX-RS resource that does implement this logic.
If you're referring to properties in application.properties. Encryption/decryption is currently not supported here but likely will be in a future release.
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