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add @PG line to bam output from extract_read-through_fusions? #5

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plijnzaad opened this issue Mar 27, 2018 · 2 comments
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add @PG line to bam output from extract_read-through_fusions? #5

plijnzaad opened this issue Mar 27, 2018 · 2 comments

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@plijnzaad
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Hi,

thanks for the nice code and extensive documentation. Would it be possible for you to make extract_read-through_fusions output an extra @PG line into the resulting bam file? Thanks a lot!

@suhrig
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suhrig commented Mar 27, 2018

Good suggestion. I'm putting it on my todo list for the next release. Will keep you updated.

@suhrig
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suhrig commented Oct 14, 2018

Hi plijnzaad,

A new release of Arriba is available. The workflow is now simpler (and faster). extract_read-through_fusions is obsolete and no read_through_fusions.bam file is generated anymore. Therefore, there is no need to add a @PG header anymore.

Regards,
Sebastian

@suhrig suhrig closed this as completed Oct 14, 2018
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