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docs: Update INSTALL.md for 3.9.2 #473

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Dec 10, 2021
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@dtrudg dtrudg commented Dec 10, 2021

Before submitting a PR, make sure you have done the following:

Match CI to docs update for go 1.17.5
@dtrudg dtrudg self-assigned this Dec 10, 2021
@dtrudg dtrudg merged commit 90bbb38 into sylabs:release-3.9 Dec 10, 2021
@dtrudg dtrudg deleted the 392-docs branch December 10, 2021 19:41
dtrudg added a commit to dtrudg/singularity that referenced this pull request Dec 10, 2021
Squashed commit of the following:

commit 90bbb38
Merge: dbe4f32 8c3143d
Author: Dave Trudgian <david.trudgian@sylabs.io>
Date:   Fri Dec 10 13:41:10 2021 -0600

    Merge pull request sylabs#473 from dtrudg/392-docs

    docs: Update INSTALL.md for 3.9.2

commit dbe4f32
Merge: 0cea468 a26bc7d
Author: Dave Trudgian <david.trudgian@sylabs.io>
Date:   Fri Dec 10 13:40:47 2021 -0600

    Merge pull request sylabs#472 from dtrudg/loopdev-39

    Pick loop device discovery change sylabs#458 & sylabs#464

commit 8c3143d
Author: David Trudgian <david.trudgian@sylabs.io>
Date:   Fri Dec 10 11:54:57 2021 -0600

    docs: Update INSTALL.md for 3.9.2

    Match CI to docs update for go 1.17.5

commit a26bc7d
Author: David Trudgian <david.trudgian@sylabs.io>
Date:   Tue Dec 7 17:52:02 2021 -0600

    Refactor loop.AttachFromFile

    The loop.AttachFromFile code, used to attach an image to a free loop
    device, or to find a shared loop device has been refactored.

    Previously, a complex loop handled both finding shared loop devices
    and attaching to new free devices. The logic was difficult to follow,
    especially with regard to tracking which errors were fatal and would
    bubble up, vs result in loop continuation, or retries.

    The shared and 'fresh' attachment have been separated into two
    functions. Some additional logging / error detail has been added.

    The test code has been modified to prevent a leak of a loop device.

    Fixes sylabs#463

commit a88d915
Author: Tom Schoonjans <Tom.Schoonjans@genomicsplc.com>
Date:   Tue Dec 7 20:52:25 2021 +0000

    Apply @dtrudg's comments

commit af42c8a
Author: Tom Schoonjans <Tom.Schoonjans@genomicsplc.com>
Date:   Tue Nov 30 20:48:37 2021 +0000

    AttachFromFile: rewrite retry loop

    When the CmdSetStatus64 syscall returns EAGAIN or EBUSY, move on to try
    the next loop device instead of aborting. Rename AttachFromFile to
    attachFromFile and run in a loop while no valid loop devices were found
    but EAGAIN or EBUSY was encountered.

    This fixes an intermittent issue encountered on Arvados Crunch (https://dev.arvados.org/issues/18489)

commit 0cea468
Merge: 3908ad2 b871d84
Author: Dave Trudgian <david.trudgian@sylabs.io>
Date:   Fri Dec 10 11:12:26 2021 -0600

    Merge pull request sylabs#469 from dtrudg/keyidx-39

    Clarify source of key index (3.9)

commit b871d84
Author: Richard Hattersley <rhattersley@gmail.com>
Date:   Thu Nov 25 09:29:02 2021 +0000

    Clarify source of key index (3.9)

commit 3908ad2
Merge: 471b3fc 5c00c11
Author: Dave Trudgian <david.trudgian@sylabs.io>
Date:   Fri Dec 10 10:11:16 2021 -0600

    Merge pull request sylabs#467 from dtrudg/issue465-39

    fix: do not require working keyserver config in local build (3.9)

commit 5c00c11
Author: David Trudgian <david.trudgian@sylabs.io>
Date:   Thu Dec 9 12:59:48 2021 -0600

    fix: do not require working keyserver config in local build (3.9)

    At the CLI level, local builds had a hard fail if a keyserver config
    could not be retrieved.

    1) Warn instead of fail. For builds that perform verification of a
       SIF it may still be possbile to verify using the local keyring.

    2) Don't attempt to get a keyserver config at all, unless build
       definition has a bootstrap that will, or may provide a SIF source
       image (library/localimage/oras/shub).

    Fixes sylabs#465

commit 471b3fc
Merge: de3dbb7 9fd911d
Author: Dave Trudgian <david.trudgian@sylabs.io>
Date:   Thu Dec 9 16:17:53 2021 -0600

    Merge pull request sylabs#470 from dtrudg/clog-shfix

    docs: Note mvdan.cc/sh related bug fixes in changelog

commit 9fd911d
Merge: 38b50cb fb84d7d
Author: Dave Trudgian <david.trudgian@sylabs.io>
Date:   Thu Dec 9 15:53:54 2021 -0600

    Merge pull request sylabs#468 from dtrudg/godep39

    fix: ensure gengodep uses vendor dir if present (3.9)

commit de3dbb7
Merge: 38b50cb fb84d7d
Author: Dave Trudgian <david.trudgian@sylabs.io>
Date:   Thu Dec 9 15:53:54 2021 -0600

    Merge pull request sylabs#468 from dtrudg/godep39

    fix: ensure gengodep uses vendor dir if present (3.9)

commit fb84d7d
Author: David Trudgian <david.trudgian@sylabs.io>
Date:   Tue Dec 7 13:20:25 2021 -0600

    fix: ensure gengodep uses vendor dir if present (3.9)

    In a previous PR, initialization of the `srcdir` varible was removed
    from `makeit/gengodep`. However, the `gengodep` script was still using
    `srcdir` when checking for a `${srcdir}/vendor/modules.txt`.

    sylabs@48e7fab

    As a result, the vendor dir is never found, and `go` was run with
    `-mod=readonly`, which would lead to downloads.

    Since go 1.14 the presence of a vendor dir infers `-mod=vendor`
    automatically, so we can just remove the handling here.

    Fixes sylabs#461
dtrudg added a commit to dtrudg/singularity that referenced this pull request Dec 10, 2021
Squashed commit of the following:

commit 90bbb38
Merge: dbe4f32 8c3143d
Author: Dave Trudgian <david.trudgian@sylabs.io>
Date:   Fri Dec 10 13:41:10 2021 -0600

    Merge pull request sylabs#473 from dtrudg/392-docs

    docs: Update INSTALL.md for 3.9.2

commit dbe4f32
Merge: 0cea468 a26bc7d
Author: Dave Trudgian <david.trudgian@sylabs.io>
Date:   Fri Dec 10 13:40:47 2021 -0600

    Merge pull request sylabs#472 from dtrudg/loopdev-39

    Pick loop device discovery change sylabs#458 & sylabs#464

commit 8c3143d
Author: David Trudgian <david.trudgian@sylabs.io>
Date:   Fri Dec 10 11:54:57 2021 -0600

    docs: Update INSTALL.md for 3.9.2

    Match CI to docs update for go 1.17.5

commit a26bc7d
Author: David Trudgian <david.trudgian@sylabs.io>
Date:   Tue Dec 7 17:52:02 2021 -0600

    Refactor loop.AttachFromFile

    The loop.AttachFromFile code, used to attach an image to a free loop
    device, or to find a shared loop device has been refactored.

    Previously, a complex loop handled both finding shared loop devices
    and attaching to new free devices. The logic was difficult to follow,
    especially with regard to tracking which errors were fatal and would
    bubble up, vs result in loop continuation, or retries.

    The shared and 'fresh' attachment have been separated into two
    functions. Some additional logging / error detail has been added.

    The test code has been modified to prevent a leak of a loop device.

    Fixes sylabs#463

commit a88d915
Author: Tom Schoonjans <Tom.Schoonjans@genomicsplc.com>
Date:   Tue Dec 7 20:52:25 2021 +0000

    Apply @dtrudg's comments

commit af42c8a
Author: Tom Schoonjans <Tom.Schoonjans@genomicsplc.com>
Date:   Tue Nov 30 20:48:37 2021 +0000

    AttachFromFile: rewrite retry loop

    When the CmdSetStatus64 syscall returns EAGAIN or EBUSY, move on to try
    the next loop device instead of aborting. Rename AttachFromFile to
    attachFromFile and run in a loop while no valid loop devices were found
    but EAGAIN or EBUSY was encountered.

    This fixes an intermittent issue encountered on Arvados Crunch (https://dev.arvados.org/issues/18489)

commit 0cea468
Merge: 3908ad2 b871d84
Author: Dave Trudgian <david.trudgian@sylabs.io>
Date:   Fri Dec 10 11:12:26 2021 -0600

    Merge pull request sylabs#469 from dtrudg/keyidx-39

    Clarify source of key index (3.9)

commit b871d84
Author: Richard Hattersley <rhattersley@gmail.com>
Date:   Thu Nov 25 09:29:02 2021 +0000

    Clarify source of key index (3.9)

commit 3908ad2
Merge: 471b3fc 5c00c11
Author: Dave Trudgian <david.trudgian@sylabs.io>
Date:   Fri Dec 10 10:11:16 2021 -0600

    Merge pull request sylabs#467 from dtrudg/issue465-39

    fix: do not require working keyserver config in local build (3.9)

commit 5c00c11
Author: David Trudgian <david.trudgian@sylabs.io>
Date:   Thu Dec 9 12:59:48 2021 -0600

    fix: do not require working keyserver config in local build (3.9)

    At the CLI level, local builds had a hard fail if a keyserver config
    could not be retrieved.

    1) Warn instead of fail. For builds that perform verification of a
       SIF it may still be possbile to verify using the local keyring.

    2) Don't attempt to get a keyserver config at all, unless build
       definition has a bootstrap that will, or may provide a SIF source
       image (library/localimage/oras/shub).

    Fixes sylabs#465

commit 471b3fc
Merge: de3dbb7 9fd911d
Author: Dave Trudgian <david.trudgian@sylabs.io>
Date:   Thu Dec 9 16:17:53 2021 -0600

    Merge pull request sylabs#470 from dtrudg/clog-shfix

    docs: Note mvdan.cc/sh related bug fixes in changelog

commit 9fd911d
Merge: 38b50cb fb84d7d
Author: Dave Trudgian <david.trudgian@sylabs.io>
Date:   Thu Dec 9 15:53:54 2021 -0600

    Merge pull request sylabs#468 from dtrudg/godep39

    fix: ensure gengodep uses vendor dir if present (3.9)

commit de3dbb7
Merge: 38b50cb fb84d7d
Author: Dave Trudgian <david.trudgian@sylabs.io>
Date:   Thu Dec 9 15:53:54 2021 -0600

    Merge pull request sylabs#468 from dtrudg/godep39

    fix: ensure gengodep uses vendor dir if present (3.9)

commit fb84d7d
Author: David Trudgian <david.trudgian@sylabs.io>
Date:   Tue Dec 7 13:20:25 2021 -0600

    fix: ensure gengodep uses vendor dir if present (3.9)

    In a previous PR, initialization of the `srcdir` varible was removed
    from `makeit/gengodep`. However, the `gengodep` script was still using
    `srcdir` when checking for a `${srcdir}/vendor/modules.txt`.

    sylabs@48e7fab

    As a result, the vendor dir is never found, and `go` was run with
    `-mod=readonly`, which would lead to downloads.

    Since go 1.14 the presence of a vendor dir infers `-mod=vendor`
    automatically, so we can just remove the handling here.

    Fixes sylabs#461
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2 participants