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Activating Klustaviewa in the pipeline #6

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gretea opened this issue Jan 5, 2018 · 0 comments
Open

Activating Klustaviewa in the pipeline #6

gretea opened this issue Jan 5, 2018 · 0 comments

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@gretea
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gretea commented Jan 5, 2018

When one opens klustaviewa in the Spike sorting pipeline to look at the clustering, using the following command:
klustaviewa 'Path to kwik-file'
It does open klustaviewa and it shows all units. However, the preview of the waveforms remains flat and one can not see any spikes. At first sight, it seems like a zooming issue, however zooming in and out does not change anything.
The same issue occurs, when one opens klustaviewa in the terminal directly, but only when one tries to open a kwik-file that is located somewhere else than in the current working directory.

Solution to the problem:
In order to properly open the kwik-file with klustaviewa, one has to set the working directory to the exact same subfolder where the kwik-file is located.

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