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@numfocus @conda-forge @theislab @nf-core @cookiejar @mlf-core @schillerlab @scverse @laminlabs
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Hi, I'm Lukas!   👾 》Scientist by day, open source contributor by night.

Co-foundermember of the steering-council at scverse
PhD studentworking on single-cell analysis best practices, scverse tooling and exploratory electronic health record analysis at Theislab.
Research software engineerAdvancing biological data management at LaminLabs

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|     Website & Gallery :    |    Open Source Work : ▼ ▼ ▼

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  1. theislab/single-cell-best-practices theislab/single-cell-best-practices Public

    Jupyter Notebook 698 153

  2. theislab/ehrapy theislab/ehrapy Public

    Electronic Health Record Analysis with Python.

    Python 134 18

  3. scverse/pertpy scverse/pertpy Public

    Perturbation Analysis in the scverse ecosystem.

    Python 93 19

  4. cookiejar/cookietemple cookiejar/cookietemple Public

    A collection of best practice cookiecutter templates for all domains and languages with extensive Github support ⛺

    Python 156 8

  5. mlf-core/mlf-core mlf-core/mlf-core Public

    CPU and GPU deterministic and therefore fully reproducible machine learning pipelines using MLflow.

    Python 46 3

  6. nf-core/mhcquant nf-core/mhcquant Public

    Identify and quantify MHC eluted peptides from mass spectrometry raw data

    Nextflow 30 25