Discussions

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  Implementation of MixScale (perturbation score)

  nancyya started Mar 25, 2024 in General

  

  

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  Using pertpy and loading in dixit_2016_raw perturb-seq data

  antoniorayrios started Aug 10, 2023 in General

  

  

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  Is performs PCA on each mixscape class separately before LDA necessary?

  XinmingTu started Jul 25, 2023 in Ideas

  

  

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  How to let pertpy run GPU

  ngvananh2508 asked Jun 21, 2023 in Q&A · Unanswered

  

  

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  Extracting gene programs by factor analysis

  kvshams started May 18, 2023 in Ideas

  

  

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  Running the scCODA model inference (pt.tl.Sccoda.run_nuts()) gives AssertionError: size of plate should be positive

  irena-starters asked May 19, 2023 in Q&A · Unanswered

  

  

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