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Multi thread usage #37

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Fu-Yin opened this issue Aug 19, 2022 · 2 comments
Closed

Multi thread usage #37

Fu-Yin opened this issue Aug 19, 2022 · 2 comments

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@Fu-Yin
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Fu-Yin commented Aug 19, 2022

Hello:
My diamond output an file, which about 10 g, and I next to use the BASTA to estimate spices in it.
However, BASTA has been worked 10 days.
Could BASTA use more threads to make it faster.
What can I do to faster?
Thanks

@timkahlke
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Hi,
First, to answer your question: no, there is no multi-threaded BASTA available. However, BASTA doesn't use a lot of resources and doesn't do complicated calculations or the like. It's a pretty simple method. I ran BASTA on much larger files in a few hours. Something else is going on there.

@Fu-Yin
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Fu-Yin commented Aug 28, 2022

Thank you for your answer
Can I watch your command? Maybe I took a wrong use.

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