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Development repository for the Bioconductor package 'mixOmics '

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This repository contains the R package now hosted on Bioconductor and our stable and development GitHub versions.

TODO to slim down:

  • remove renv
  • remove LaTeX syntax from roxygen
  • trim down the mint internals
  • use hardhat?
  • move to rlang error and warning functions
  • make minimal PLS test cases using current mixOmics
  • use utils::globalVariables()
  • remove all parallel processing
  • remove tuning functions
  • remove performance functions
  • remove resampling functions

Important argment:

  • mode: regression", "canonical", "invariant", "classic"
  • ncomp
  • keepX: counts (move to proportion)

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Development repository for the Bioconductor package 'mixOmics '

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