Nucleosome Dynamics wrappers for MuGVRE platform
-
Updated
Apr 12, 2019 - Python
Nucleosome Dynamics wrappers for MuGVRE platform
ChromeBat: A Bio-Inspired Approach to 3D Genome Reconstruction
Deep Learning of Sequence Patterns for CTCF-Mediated Chromatin Loop Formation
DeepLncCTCF for identification and analysis of consensus RNA motifs binding to the genome regulator CTCF
nuclear compartmentalization, 3D genome, nuclear bodies, MRF
A Web-Server implementation of ParticleChromo3D for 3D chromosome structure reconstruction
Script to cluster Paired End Tags (PETs) from chromatin conformation capture (3C) experiments
FIREcaller: Python library for detecting Frequently Interacting REgions (FIREs) from Hi-C data
Transformer-based model to predict genome-wide chromosome spatial position
3DGB is a workflow to build 3D models of genomes from HiC data
Data and the co-authored network I extracted for lab selection in 3D genome research field
multiway chromatin interaction, 3D genome, single-nucleus, hypergraph representation learning
nuclear compartments, subcompartments, nuclear organization, Hi-C, autoencoder
Enhanced and elegant flexible peak/loop/domain -calling and analysis tool for 1D/3D genomic data.
Add a description, image, and links to the 3d-genome topic page so that developers can more easily learn about it.
To associate your repository with the 3d-genome topic, visit your repo's landing page and select "manage topics."