Complete Docker Image including pre-processing, bronchinet and post-processing tools.
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Updated
Mar 5, 2024 - Python
Complete Docker Image including pre-processing, bronchinet and post-processing tools.
MICCAI2019: 3D U2-Net: A 3D Universal U-Net for Multi-Domain Medical Image Segmentation
Example of brain tumor segmentation.
Whole Body Positron Emission Tomography Attenuation Correction Map Synthesizing using 3D Deep Networks
Robust Chest CT Image Segmentation of COVID-19 Lung Infection based on limited data
3D U-net, Attention U-net, Res U-net, Attention Res U-net, and MSRes U-net are implemented and compared for emulation of current density induced during transcranial direct current stimulation (tDCS).
Pytorch implementation of 'Temporally Adjustable Longitudinal Fluid-Attenuated Inversion Recovery MRI Estimation / Synthesis for Multiple Sclerosis' accepted to MICCAI BrainLes Worshop 2022
[EMBC 2021] Official Implementation for "Hierarchical Consistency Regularized Mean Teacher for Semi-supervised 3D Left Atrium Segmentation"
Distributing Deep Learning Hyperparameter Tuning for 3D Medical Image Segmentation
Official Repository for the paper: Distributing Deep Learning Hyperparameter Tuning for 3D Medical Image Segmentation
Code repository for training a brain tumour U-Net 3D image segmentation model using the 'Task1 Brain Tumour' medical segmentation decathlon challenge dataset.
PyTorch implementation of the UNet model -- https://arxiv.org/abs/1505.04597
A modular, 3D unet built in keras for 3D medical image segmentation. Also includes useful classes for extracting and training on 3D patches for data augmentation or memory efficiency.
PyTorch implementation of 3D U-Net with model parallel in 2GPU for large model
3D U-Net with tf.keras for Large-Model-Support or Unified Memory
We provide DeepMedic and 3D UNet in pytorch for brain tumore segmentation. We also integrate location information with DeepMedic and 3D UNet by adding additional brain parcellation with original MR images.
3D Unet for Isointense Infant Brain Image Segmentation
Fully supervised, multi-class 3D brain segmentation in T1 MRI using an ensemble of diverse CNN architectures (3D FCN, 3D U-Net) with multi-scale input.
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