Comparison of Hi-C Experiments using Structural Similarity.
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Updated
Jul 18, 2023 - Python
Comparison of Hi-C Experiments using Structural Similarity.
Identification of dynamic changes in chromatin conformation is a fundamental task in genetics. In 2020, Galan et al. presented CHESS (Comparison of Hi-C Experiments using Structural Similarity), a novel computational algorithm designed for systematic identification of structural differences in chromatin-contact maps. Using CHESS, the same group …
The code from the paper "Benchmark of software tools for prokaryotic chromosomal interaction domain identification"
WIP. This project aims to quantify the information in genome architecture data. An extensive chromatin toymodel is used for internal method development
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