The analytical pipeline of the AL4 strain genome
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Updated
Feb 3, 2020 - R
The analytical pipeline of the AL4 strain genome
Retroviral Integration Pattern Analysis Tool
MORFEE: Mutation on Open Reading FramE annotation
Companion repository to the article: "Comparative whole-genome approach to identify bacterial traits for microbial interactions"
All scripts and pipelines related to inferring ploidy, hybridization and MAT locus architecture in the lichen symbionts from the genus Letharia
Scripts for genome assembly associated tasks - scripts and parameters set up for run on Compute Canada HPC
Pipeline for eukaryotic genome annotation based on external evidences
Annotation for full-genome assembly of Escherichia coli str. K12, substr. MG1655
Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣
Repozitorijoje saugomi failai, implementuojantys R Shiny aplikaciją ir leidžiantys vertinti įkeltų genominių duomenų kokybę bei vykdyti biologines analizes.
Package Homepage: http://bioconductor.org/packages/devel/bioc/html/annotatr.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=annotatr.
echoverse module: Annotate fine-mapping results
Genomic Data Retrieval with R
An R/Bioconductor package to predict intergenic transcript models from RNA-seq
preparing and visualizing proteome to genome alignments
Scripts and pipeine for Genome_assembly_annotation
Scripts for Hill et al. (in review) 🌾
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