Pipeline to bin 10X, HiC, PacBio and ONT reads based on ancestry assemblies
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Updated
Oct 14, 2019 - C
Pipeline to bin 10X, HiC, PacBio and ONT reads based on ancestry assemblies
A de novo genome breakpoint sequence assembly algorithm
guided genome assembler using colored overlap graphs
BLEND is a mechanism that can efficiently find fuzzy seed matches between sequences to significantly improve the performance and accuracy while reducing the memory space usage of two important applications: 1) finding overlapping reads and 2) read mapping. Described by Firtina et al. (published in NARGAB https://doi.org/10.1093/nargab/lqad004)
De novo genome assembly and multisample variant calling
Fast and accurate de novo assembler for long reads
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