Kernelized HAplotype-based MIXed model association mapping (KHAMIX)
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Updated
May 24, 2024 - R
Kernelized HAplotype-based MIXed model association mapping (KHAMIX)
A set of functions for filtering erroneous sequences in eDNA metabarcoding data
TFM_AliciaAranda_QApckg
An efficient genetic data imputation pipeline
This repository contains the files from my master thesis project required to conduct a whole-genome analysis of haploblocks in wheat based on pairwise comparisons between assemblies. This is based on a previous method (https://doi.org/10.1038/s42003-020-01413-2), but focuses on the the quality of the pairwise comparisons to call haplotypes.
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