Nextflow pipeline to detect and classify microbial reads in sequencing data from human samples.
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Updated
Jul 9, 2024 - Nextflow
Nextflow pipeline to detect and classify microbial reads in sequencing data from human samples.
Assembly and annotation of metatranscriptomic or metagenomic data for prokaryotic, eukaryotic and viruses.
Pipeline for metagenome and metatranscriptome joint assembly
Nextflow (nf-core) workflow for mapping reads to large collections of genomes.
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