cronology is an automated workflow for Cronobacter whole genome sequence assembly, subtyping and isolate clustering based on NCBI Pathogen Detection Project for Cronobacter.
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Updated
Feb 14, 2024 - Nextflow
cronology is an automated workflow for Cronobacter whole genome sequence assembly, subtyping and isolate clustering based on NCBI Pathogen Detection Project for Cronobacter.
Pathogen whole genome sequence (WGS) data analysis pipeline
Run mlst on multiple samples with integrated quality control.
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