Pathogen whole genome sequence (WGS) data analysis pipeline
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Updated
May 2, 2024 - Nextflow
Pathogen whole genome sequence (WGS) data analysis pipeline
cronology is an automated workflow for Cronobacter whole genome sequence assembly, subtyping and isolate clustering based on NCBI Pathogen Detection Project for Cronobacter.
Run mlst on multiple samples with integrated quality control.
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