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multiqc
Here are 3 public repositories matching this topic...
Quality Control, Mapping and Reads Count for RNA-Seq Analysis
bioinformatics
quality-control
mapping
bioinformatics-pipeline
multiqc
star
hisat2
rna-seq-analysis
featurecounts
rna-seq-mapping
fastqc
rna-seq-pipeline
htseq-count
rna-seq-qc
rnaseqpipeline
trimmomatic
rna-seq-aligner
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Updated
Mar 29, 2022 - R
Walks through installation and usage of FASTQC, MultiQC, Trimmomatic, and Salmon for transcriptomic data preprocessing. Includes Grid Engine shell scripts that can be looped over many files in a directory.
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Updated
Feb 9, 2024 - R
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