VIral GEnome ASsembly pipelines for WGS
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Updated
May 10, 2024 - Shell
VIral GEnome ASsembly pipelines for WGS
Patch for LRSDAY v1.6 for Debian-based and SUSE-based OS.
Influenza A Full-Length Consensus Calling for Nanopore Sequencing Data
Nanopore sequencing experimental protocols and computational pipelines
Rapid comprehensive adaptive nanopore-sequencing of CNS tumours set-up and analysis pipeline
Viral genome assembly pipeline for WGS using ONT
A tool to filter short artificial deletion variations by Oxford Nanopore Technologies R9 and R10 flow cells and chemistries.
NanoASV official repo
A small bash script that automates sweeping Guppy parameters in an attempt to optimise basecalling rate
Splitting and accelerating the Oxford Nanopore basecaller guppy using CPU with the SLURM job scheduler
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