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Coding to music
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Coding to music

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@ESR-NZ @GenomicsAotearoa
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sirselim/README.md

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👋 Hi there! I'm Miles

I'm a bioinformatician / computational geneticist based in Wellington, New Zealand. I am currently working at ESR (Institute of Environmental Science and Research) as a Senior Bioinformatician. I also dabble at photography and guitar, with a side of coffee, beer and single malts in the mix.

I have written and maintiain several documents about GPU compute for Nanopore sequencing that people find helpful, feel free to check them out:

You can find out more about me and connect in different ways below:

Website Twitter ORCID Google Scholar CV



Pinned

  1. A place to collate notes and resources of our journey into porting nanopore sequencing over to accessible, portable technology.

    55 5

  2. 1
    # Jetson Xavier basecalling notes
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    ## initial basecalling runs 
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    #### 'fast' flip-flop calling on the Jetson Xavier
  3. Exploration of new Zealand COVID19 data from the MoH

    HTML 2

  4. Pipeline to filter whole exome vcf files and generate a report document for clinical diagnostics.

    Shell 9 6

  5. A Shiny interface to filter and identify variants of interest from whole exome data

    CSS 5 5

  6. A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays

    14 16

352 contributions in the last year

Sep Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep Mon Wed Fri

Contribution activity

September 2021

Created 1 repository
Reviewed 1 pull request in 1 repository
sirselim/jetson_nanopore_sequencing 1 pull request
Started 1 discussion in 1 repository
sirselim/jetson_nanopore_sequencing

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