KGX is a Python library for exchanging Knowledge Graphs
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Updated
Jul 9, 2024 - Python
KGX is a Python library for exchanging Knowledge Graphs
Autonomous relay system for NCATS Biomedical Data Translator
Build system for the RTX-KG2 biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)
Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)
A TRAPI-compliant component of ARAGORN that queries distributed KPs and assembles answers to user questions.
MyGene.info: A BioThings API for gene annotations
MyChem.info: A BioThings API for chemical/drug annotations
A TRAPI-compliant component of ARAGORN that groups together similar results.
Service that produces Translator compliant nodes given a curie
Babel creates cliques of equivalent identifiers across many biomedical vocabularies.
A collection of useful python functions for looking up information and working with the Biolink Model
Schema and generated objects for biolink data model and upper ontology
MyVariant.info: A BioThings API for human variant annotations
An Autonomous Reasoning Agent in the NCATS Biomedical Translator Network that uses EHR and multi-omic cohorts to rank results from user queries
Plater automatically creates a TRAPI interface for a biolink-compliant neo4j graph.
A Translator ARA combining asynchronous database querying, answer coalescence, and answer ranking.
BioThings API framework - Making high-performance API for biological annotation data
A service for finding CURIEs from lexical strings.
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