An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.
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Updated
May 23, 2024 - R
An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.
🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R https://shixiangwang.github.io/sigminer/reference/index.html
Code for our ICML '18 paper "Closed-form Marginal Likelihood in Gamma-Poisson Matrix Factorization"
seqArchR: Identifying (promoter) sequence architectures de novo using NMF
R package implementing Bayesian NMF using various models and prior structures.
An R code for classifying GCxGC data based on a NMF algorithm
archR: Identifying promoter sequence architectures de novo using NMF
This project, done for GA Tech, explores relationship between health factors and hospitalization in NHANES dataset
Filling missing data for congressional voting dataset from UCI Machine Learning Repository
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