SOPanG, a simple tool for pattern matching over an elastic-degenerate string, a recently proposed simplified model for the pan-genome.
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Updated
Apr 16, 2020 - C++
SOPanG, a simple tool for pattern matching over an elastic-degenerate string, a recently proposed simplified model for the pan-genome.
Reference-free FASTQ filter for rare germline and somatic variants
panicmage can estimate gene gain and loss rates, the size of pan-genomes, and test for neutral evolution.
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