The ENCODE-DCC demo workflow in Snakemake (under development)
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Updated
Sep 1, 2019 - HTML
The ENCODE-DCC demo workflow in Snakemake (under development)
Bulk RNA-seq analytical pipeline, including using Snakemake to run main steps such as Kallisto read mapping, QC, Principal Component Analysis (PCA), and other downstream analysis.
A simple Snakemake workflow to perform network analyses using the Python Geneset Network Analysis (PyGNA) package.
Repository that hosts the course materials for the 2017 edition of Programming Practices for Research in Economics at the University of Zurich
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