rMETL - realignment-based Mobile Element insertion detection Tool for Long read
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Updated
Aug 13, 2024 - Python
rMETL - realignment-based Mobile Element insertion detection Tool for Long read
Analysis and selection of primers for the study of transposable elements.
Tool to find mge (phages, plasmids, and transposons) in cdiff. Scripts that allow Clostyper to be run in slurm.
Bi-allelic genotyping of reference transposable elements
Scan genomes for internally repeated sequences, elements which are repetitive in another species, or high-identity HGT candidate regions between species.
Map TIR-pHMM models to genomic sequences for annotation of MITES and complete DNA-Transposons.
Supporting repository for article "Software Evaluation for 'de novo' Detection of Transposons"
A Python3 library for transposon fingerprinting
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