Build error when building new image on top of the nvcr.io/nvidia/tritonserver:24.04-py3-sdk container image from NGC

[jackylu0124]

Description
I am trying to build my own Triton client container image based off the nvcr.io/nvidia/tritonserver:24.04-py3-sdk container image, in which I install additional packages with pip. The issue arises when I tried to install Flask, and I encountered the following error logs:

2.793 Installing collected packages: MarkupSafe, itsdangerous, click, blinker, Werkzeug, Jinja2, Flask
2.879   Attempting uninstall: blinker
2.880     Found existing installation: blinker 1.4
2.881 ERROR: Cannot uninstall 'blinker'. It is a distutils installed project and thus we cannot accurately determine which files belong to it which would lead to only a partial uninstall.

and upon further debugging, I found that the blinker package is required by Flask, and then I also found that there's python3-blinker package that's managed by apt-get, which I believe is what "a distutils installed project" in the build error log is referring to. In other words, I think we encountered this error log due to the conflicting presence of the blinker packages in both places, managed by different package managers.

I have also done some investigations online, and people mostly suggest the following two workarounds, or a combination of the two:

1. Add the RUN apt-get remove -y python3-blinker step before installing the requirements.txt file with pip (see the updated Dockerfile below).

# syntax=docker/dockerfile:1

FROM nvcr.io/nvidia/tritonserver:24.04-py3-sdk AS base

RUN apt-get update -y

RUN apt-get remove -y python3-blinker

COPY requirements.txt requirements.txt
RUN pip3 install -r requirements.txt

FROM base as primary
# Build command: docker build --rm --target=primary -t my_triton_client .

2. Add the RUN pip3 install --ignore-installed --no-cache-dir blinker step before installing the requirements.txt file with pip (see the updated Dockerfile below).

# syntax=docker/dockerfile:1

FROM nvcr.io/nvidia/tritonserver:24.04-py3-sdk AS base

RUN apt-get update -y

RUN pip3 install --ignore-installed --no-cache-dir blinker

COPY requirements.txt requirements.txt
RUN pip3 install -r requirements.txt

FROM base as primary
# Build command: docker build --rm --target=primary -t my_triton_client .

I think either one of them alone should work for the time being as a workaround, but I don't know which one is better and less "hacky" and also with less side-effects, because I see https://stackoverflow.com/questions/53807511/pip-cannot-uninstall-package-it-is-a-distutils-installed-project discussing the potential issues of using the --ignore-installed flag in the RUN pip3 install --ignore-installed --no-cache-dir blinker command since we are essentially overwriting the original installation; but on the other hand, python3-blinker is a system package (googlecolab/colabtools#3976), and I don't know whether removing the python3-blinker package with the RUN apt-get remove -y python3-blinker command would introduce any unexpected side-effects.

Therefore, in addition to reporting this issue, I would like to ask for your suggestions on what I should do in order to resolve the build issue. Thank you very much for your time and help in advance!

Reference links on the similar issues I found online:

1. https://stackoverflow.com/questions/53807511/pip-cannot-uninstall-package-it-is-a-distutils-installed-project
2. https://stackoverflow.com/questions/49932759/pip-10-and-apt-how-to-avoid-cannot-uninstall-x-errors-for-distutils-packages
3. https://stackoverflow.com/questions/50421287/pip-cannot-uninstall-ipython-it-is-a-distutils-installed-project-and-thus-w
4. ERROR: Cannot uninstall 'blinker'. It is a distutils installed project and thus we cannot accurately determine which files belong to it which would lead to only a partial uninstall. mem0ai/mem0#506
5. Unable to upgrade blinker googlecolab/colabtools#3976
6. Blinker not installing rsmusllp/king-phisher#300
7. https://forums.developer.nvidia.com/t/error-when-doing-docker-build-for-jetson-inference/288085

Triton Information

What version of Triton are you using?

I am using Triton version 2.45.0 and its corresponding container image nvcr.io/nvidia/tritonserver:24.04-py3-sdk on NGC.

Are you using the Triton container or did you build it yourself?

I am using the nvcr.io/nvidia/tritonserver:24.04-py3-sdk container image from NGC.

To Reproduce
I have included both the Dockerfile and also the requirements.txt in the attached zipped file. I am also pasting the content of both files below for convenience. To reproduce the build error, I think you just have to run the docker build --rm --target=primary -t my_triton_client . command in the directory containing the Dockerfile and then you will see the build error logs shown above.

Dockerfile:

# syntax=docker/dockerfile:1

FROM nvcr.io/nvidia/tritonserver:24.04-py3-sdk AS base

RUN apt-get update -y

COPY requirements.txt requirements.txt
RUN pip3 install -r requirements.txt

FROM base as primary
# Build command: docker build --rm --target=primary -t my_triton_client .

requirements.txt:

Flask==3.0.3

Expected behavior
The build error should not happen when I install additional packages (e.g. Flask) on top of the nvcr.io/nvidia/tritonserver:24.04-py3-sdk container image. I tried installing Flask in the same workflow on top of the nvcr.io/nvidia/tritonserver:23.03-py3-sdk container image, and there was no build error during the image building process.

[mc-nv]

I believe issue is pretty straight forward.
If customer facing issue with installed products, he can modify image per his own needs but no support for customization will be provided.

I haven't found issue with following instructions within nvcr.io/nvidia/tritonserver:24.04-py3-sdk container:

apt remove -y python3-blinker python-blinker-doc
pip3 install Flask

[jackylu0124]

Hi @mc-nv , thank you very much for your replies and insights!

1. Could you elaborate on what you mean by the "instructions within nvcr.io/nvidia/tritonserver:24.04-py3-sdk container" and where can I find that instructions?
2. Also could you please explain why we need to remove python-blinker-doc in addition to python3-blinker?
3. Is using apt remove -y python3-blinker python-blinker-doc preferable to doing pip3 install --ignore-installed --no-cache-dir blinker?

Thanks a lot for your time and help again!

[jackylu0124]

Hi @mc-nv , a quick follow-up to this issue, I ran apt list --installed and also dpkg -l in the nvcr.io/nvidia/tritonserver:24.04-py3-sdk container, but I can only find the python3-blinker package and cannot find the python-blinker-doc package.

1. Could you please explain why we need to remove python-blinker-doc in addition to python3-blinker?
2. Could you elaborate on what you mean by the "instructions within nvcr.io/nvidia/tritonserver:24.04-py3-sdk container" and where can I find that instructions? I couldn't find the instructions inside the container, could you please let me know where it is located?
3. Is using apt remove -y python3-blinker python-blinker-doc preferable to doing pip3 install --ignore-installed --no-cache-dir blinker?

Thanks a lot for your time and help again!

[jackylu0124]

Hi @mc-nv, a quick follow-up to this issue. Thank you!

[mc-nv]

Sorry, I have nothing to add on this issue.

Given error is indicates, that you can't update packages installed with apt using pip.
There why you have to remove it first.

[jackylu0124]

Hi @mc-nv , thank you for your reply!

1. I understand that we have to remove the package due to the error, but my question is why we have to remove python-blinker-doc in addition to python3-blinker instead of just removing python3-blinker? Could you also explain where the python-blinker-doc package is in the container because I cannot find it by inspecting the results after running apt list --installed and also dpkg -l.

2. Could you elaborate on what you mean by the "instructions within nvcr.io/nvidia/tritonserver:24.04-py3-sdk container" and where can I find that instructions? I couldn't find the instructions inside the container, could you please let me know where it is located?

3. Is using apt remove -y python3-blinker python-blinker-doc preferable to doing pip3 install --ignore-installed --no-cache-dir blinker?

Thank you for your time and help again!

[jackylu0124]

A quick followup on the qustions above, thanks!

[jackylu0124]

A quick followup on the qustions above, thanks!