Merge pull request #378 from robymetallo/master

Updated grep and regexp to fix bug when detecting parallel version
tseemann · Apr 15, 2019 · a52a8b0 · a52a8b0
2 parents 568b7e1 + cf0be46
commit a52a8b0
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/bin/prokka b/bin/prokka
@@ -86,8 +86,8 @@ my $BIDEC = '(\d+\.\d+)';  # pattern of NN.NN for versions that can be compared
 
 my %tools = (
   'parallel' => {
-    GETVER  => "parallel --version | grep '^GNU parallel 2'",
-    REGEXP  => qr/GNU parallel (\d+)/,
+    GETVER  => "parallel --version | grep -E 'parallel 2[0-9]{7}\$'",
+    REGEXP  => qr/parallel (\d+)/,
     MINVER  => "20130422",
     NEEDED  => 1,
   },