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Once we've nailed the problem of producing reliable and compatible file uploading software, we'll look into performance and investigate the best options. (the lowest hanging fruit is probably utilizing multiple connections per upload)
This is about programs --some of them with the protocol explained-- that got great speed to upload files:
http://www.tcnj.edu/~bush/uftp.html
http://udt.sourceforge.net/
http://tsunami-udp.sourceforge.net/
And this information is to tune TCP to get high performance data transfers:
http://www.psc.edu/index.php/networking/641-tcp-tune
I hope it can be useful at some point.
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