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Streamlit Cloud support #5

Merged
merged 3 commits into from
Feb 23, 2023
Merged

Streamlit Cloud support #5

merged 3 commits into from
Feb 23, 2023

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wilkb777
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@wilkb777 wilkb777 commented Feb 22, 2023

This PR adds updates to the conda environment to allow for DITTO-UI to be deployed to Streamlit Cloud.

This update was tested and successfully deployed to Streamlit Cloud and functionality was verified to match local deploys.

@wilkb777 wilkb777 self-assigned this Feb 22, 2023
ReadMe.md Outdated
@@ -12,8 +12,8 @@ function, DITTO deleterious score and Clinvar reported significance.

## Data

We use dbNSFP data (downloaded on xx/xx/2022) for training DITTO and predictions. Domain information is extracted from
Uniprot.
DITTO-UI comprises precomputed DITTO scores for missense variants using dbNSFP data (downloaded on xx/xx/2022) for
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dbNSFP downloaded on 03/19/2022

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added now

We use dbNSFP data (downloaded on xx/xx/2022) for training DITTO and predictions. Domain information is extracted from
Uniprot.
DITTO-UI comprises precomputed DITTO scores for missense variants using dbNSFP data (downloaded on xx/xx/2022) for
training DITTO and making predictions. Domain information is extracted from Uniprot via an API query on page render.

## Usage

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The new URL is https://cgds-ditto.streamlit.app once it is installed

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good to know, updated this now

@wilkb777 wilkb777 merged commit fc71b53 into main Feb 23, 2023
@wilkb777 wilkb777 deleted the steamlit-cloud-conda branch February 23, 2023 02:35
wilkb777 added a commit that referenced this pull request Dec 4, 2023
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2 participants