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PXP-7296 PXP-7180 Feat/va gwas app #777

Merged
merged 43 commits into from
Feb 1, 2021
Merged

PXP-7296 PXP-7180 Feat/va gwas app #777

merged 43 commits into from
Feb 1, 2021

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mfshao
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@mfshao mfshao commented Dec 22, 2020

This PR fulfills https://ctds-planx.atlassian.net/browse/PXP-7296 and https://ctds-planx.atlassian.net/browse/PXP-7180

Complete VA GWAS app by adding the following features

  1. Connect with workspace storage service
  2. Post new jobs to mariner
  3. Monitor mariner job status

Deployed at https://qa-mickey.planx-pla.net/analysis/vaGWAS (make sure you have mariner_admin policy in user.yaml in order to submit mariner jobs)

New Features

  • The new VA GWAS app is implemented
  • VA GWAS app now talks to workspace storage service for handling files
  • VA GWAS app now talks to mariner for submitting new GWAS jobs
  • VA GWAS app now has a progress tracking component to visualize mariner job status and display logs

Deployment changes

  • Added new entry GWASApp for analysisTools for this new GWAS app for VA. Beaware not to confuse with the old "GWAS PoC" app, which bears the entry vaGWAS
  • antd modal now by default will use g3-color__base-blue as header background color, this is consistant with our color schemes for other UI components. If an env has customized color scheme, please override .ant-modal-header in gitops.css

@mfshao mfshao changed the title PXP-7296 Feat/va gwas app PXP-7296 PXP-7180 Feat/va gwas app Dec 22, 2020
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2 participants