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846c0b181fff: Download complete
f96e9dd83687: Download complete
846c0b181fff: Pull complete
f96e9dd83687: Pull complete
Digest: sha256:782a0162eae1a83cc4a16398c42b38a089b83b54a564db0fb394aa92656895e7
Status: Image is up to date for ghcr.io/uclahs-cds/mopepgen:0.11.2
[ 2023-02-07 21:49:31 ] moPepGen filterFasta started
[ 2023-02-07 21:50:14 ] Peptide FASTA file loaded.
[ 2023-02-07 21:50:15 ] Gene expression table loaded.
Traceback (most recent call last):
File "/usr/local/bin/moPepGen", line 8, in <module>
sys.exit(main())
File "/usr/local/lib/python3.8/site-packages/moPepGen/cli/__main__.py", line 89, in main
args.func(args)
File "/usr/local/lib/python3.8/site-packages/moPepGen/cli/filter_fasta.py", line 193, in filter_fasta
filtered_pool = pool.filter(
File "/usr/local/lib/python3.8/site-packages/moPepGen/aa/VariantPeptidePool.py", line 103, in filter
for x in entry.get_transcript_ids())
File "/usr/local/lib/python3.8/site-packages/moPepGen/aa/VariantPeptideLabel.py", line 261, in get_transcript_ids
raise ValueError('Variant ID unrecognized')
ValueError: Variant ID unrecognized
Work dir:
work/60/e26ee93d05c26e7a6e3631ba35d222
Tip: when you have fixed the problem you can continue the execution adding the option `-resume` to the run command line
Work dir:
/scratch/a7/5482af9f3b5b4c44beed6d78aff0a3
Tip: you can try to figure out what's wrong by changing to the process work dir and showing the script file named `.command.sh`
Maybe also worth double checking all the other steps LOL, like merge and split?
The text was updated successfully, but these errors were encountered:
Getting this error
Maybe also worth double checking all the other steps LOL, like merge and split?
The text was updated successfully, but these errors were encountered: