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Add CLI command mergeFasta to combine variant peptides called from different samples #380

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zhuchcn opened this issue Jan 31, 2022 · 0 comments · Fixed by #384
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@zhuchcn
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zhuchcn commented Jan 31, 2022

I wonder about the TMT part, cuz that would create variant interactions that should not be present in any sample. I havn't tried this but it sounds safer to do sample specific databases, and then do a "combineFASTA" to create a database for the entire plex? sounds like a to-do for MPG

Originally posted by @lydiayliu in uclahs-cds/pipeline-call-NonCanonicalPeptide#4 (comment)

@zhuchcn zhuchcn changed the title Add CLI command combineFasta to combine variant peptides called from different samples Add CLI command mergeFasta to combine variant peptides called from different samples Feb 8, 2022
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