moving suggests to depends

waldronlab · Jul 29, 2017 · 533ccfa · 533ccfa
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diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,5 +1,5 @@
 Package: enrichOmics
-Version: 0.99.0
+Version: 1.0.0
 Title: Functional enrichment analysis of high-throughput omics data
 Author: Ludwig Geistlinger, Marcel Ramos, Lucas Schiffer, Levi Waldron
 Maintainer: Ludwig Geistlinger <Ludwig.Geistlinger@sph.cuny.edu>
@@ -11,8 +11,8 @@ Description: Overview of existing methods for enrichment analysis of gene
     regulatory elements. Outlook on current developments to extend gene set
     enrichment analysis for data derived from multiple high-throughput omics
     assays. 
-Depends: R(>= 3.4)
-Suggests: ALL,
+Depends: R(>= 3.4),
+	ALL,
     BSgenome.Hsapiens.UCSC.hg19.masked,
     BiocStyle,
 	EnrichmentBrowser,

diff --git a/vignettes/enrichOmics.Rmd b/vignettes/enrichOmics.Rmd
@@ -792,8 +792,9 @@ score.moa[,1:5]
 ```
 
 This produces individual enrichment scores for each sample.
-We use the `r Biocpkg("limma")` for comparison of sample groups, analogous to 
-differential expression analysis.
+We use functionality from the `r Biocpkg("limma")` package for comparison of
+sample groups, 
+analogous to differential expression analysis.
 Here, we define the groups according to presence of the BRCA mutation.
 
 ```{r limmaMOGSA}