SequenceServer - BLAST searching made easy!
SequenceServer lets you rapidly set up a BLAST+ server with an intuitive user interface for use locally or over the web.
Please see http://www.sequenceserver.com.
You will need Ruby and NodeJS and respective package managers (RubyGems and npm) for development.
Get source code.
git clone https://github.com/yannickwurm/sequenceserver cd sequenceserver
gem install bundler && bundle
We use Capybara with WebKit driver for functional testing. If the above step
qt (On Mac:
brew install qt) and run
If you are deploying SequenceServer from git (not advised) you can skip
installing development dependencies (and
qt) by running
bundle install --without=development
Run, test, lint
# Launch SequenceServer in development mode. bundle exec bin/sequenceserver -D # Run RSpec, Capybara, and RuboCop. rake # Run bootlint, csslint, jshint npm run-script cop # Minify JS and CSS npm run-script build
SequenceServer runs in production mode by default. Minified JS and CSS are picked in production mode only.