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Phase Field Model

tag gcc openmpi python hdf5 cmake license

The resource management system for the HPC clusters is slurm.

Here shows one of the example videos: example_video

How to compile

Make sure you have installed CMake in your machine,

  1. cd build
  2. cmake ..
  3. make

If everything goes smoothly, after cd .., you will see an executable file test.exe in the main directory.

How to run

  1. create a directory with name data mkdir data
  2. submit your job to the cluster with command sbatch script.slurm, or just mpiexec -n #CORES test.exe, where #CORES is the number of cores you can use

All the data are in the data fold in HDF5 format.

How to plot

  1. creat a directory with name figures mkdir figures
  2. python py-plot/plot.py or use the MPI version mpiexec -n #CORES python py-plot/plot_mpi.py

All the figures or videos are in the figures fold.

Notice

Since I haven't constructed the standard input files yet, you have to modify the src/main.cpp and py-plot/plot(_mpi).py files to change input parameters.


Created by W. Wang on 2021-6-23.

Copyright © Wei Wang.