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Results regarding the identification of transposons #10

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mengqiyue opened this issue Jan 20, 2024 · 2 comments
Open

Results regarding the identification of transposons #10

mengqiyue opened this issue Jan 20, 2024 · 2 comments

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@mengqiyue
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I would like to understand how the output results in transposon.possible.tsv are defined. What criteria are used to determine 'all possible transposon elements'?

@xthua
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xthua commented Jan 22, 2024

The file transposon.possible.tsv contains the raw alignment results from the original BLAST, without undergoing identity and coverage filtering.

@marveloushaotian
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Hi! I would like to ask how the %COVERAGE in transposon.possible is calculated? Thank you!

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