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DESCRIPTION
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DESCRIPTION
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Package: SLICE
Type: Package
Title: Determining Cell Differentiation and Lineage based on Single Cell Entropy
Version: 0.99.0
Date: 2017-05-15
Authors@R: person("Minzhe", "Guo", email = "minzhe.guo@cchmc.org", role = c("aut", "cre"))
Depends: R (>= 3.2.0), Biobase, graph, gridExtra, BioNet, entropy, cluster, ggplot2,
grid, princurve, splines, mgcv, lmtest, igraph, reshape2
Maintainer: Minzhe Guo <minzhe.guo@cchmc.org>
URL: https://github.com/minzheguo/SLICE
BugReports: https://github.com/minzheguo/SLICE/issues
Description: This is the R package of the SLICE algorithm, which utilizes single-cell RNA-seq (scRNA-seq) data to quantitatively measure cellular differentiation states based on single cell entropy and predict cell differentiation lineages via the construction of entropy directed cell trajectories.
License: GPL-3
LazyData: TRUE
RoxygenNote: 7.2.3