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AssertionError: daemonic processes are not allowed to have children #4

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shinohara-xiao opened this issue Mar 29, 2023 · 1 comment

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@shinohara-xiao
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Hi !

When I run the code, I got an "AttributeError: module 'scvi.data' has no attribute 'setup_anndata'" ,
I Searched and fund that the module changed,
so I changed "scvi.data.setup_anndata(adata, batch_key = 'batch')" to scvi.model.SCVI.setup_anndata(adata,batch_key = 'batch'),
But after this, I got an "assertionError: daemonic processes are not allowed to have children"
How this happened and what can I do to solve this problem?

@yezhengSTAT
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Hello,
Thanks for bringing it up! A quick solution is to install a relatively older version of scvi-tools such as 0.14.5. Considering the scvi-tools is going through rapid update, maybe using the older but stabler version will work.

Thanks,
Ye

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