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Import long reactions as YAML representation #4

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jonls opened this issue Dec 11, 2015 · 1 comment
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Import long reactions as YAML representation #4

jonls opened this issue Dec 11, 2015 · 1 comment
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@jonls
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jonls commented Dec 11, 2015

Currently, all reactions are imported as a reaction string (e.g. "(3) |A| + (4) |B| => ..."). For long reactions, using the YAML representation better allows the user to read and edit the reaction than when using the string representation. Above a threshold, the reactions should be represented as YAML format.
dozingpip pushed a commit to dozingpip/psamm-import that referenced this issue May 25, 2016
importer: fixed it so reactions with more than 10 compounds get repre…
94a67b4 
…sented

in a list format instead of one line/ string. (Issue zhanglab#4)
@dozingpip dozingpip mentioned this issue May 27, 2016
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spikeliu pushed a commit to spikeliu/psamm-import that referenced this issue Jun 21, 2016
@spikeliu
importer: check if reactions have more than 10 compounds
ce5df6b 
in a list format instead of one line/ string. (Issue zhanglab#4)
@spikeliu spikeliu mentioned this issue Jun 21, 2016
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@jonls
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jonls commented Jun 30, 2016

Fixed in #12

@jonls jonls closed this as completed Jun 30, 2016
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