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Lookup sort #86

Merged
merged 24 commits into from
Apr 2, 2018
Merged

Lookup sort #86

merged 24 commits into from
Apr 2, 2018

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sbreiff
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@sbreiff sbreiff commented Mar 28, 2018

Implemented ordering of fields by lookup number, and automatic ordering of sheets. Removed "--order" arg. Removed old ordering functions and tests. Also modified sheet_order to move Biosample and BiosampleCellCulture after Biosource because it seemed to make more sense.

I also removed "ExperimentMic_Path" from sheet_order because it prevents '--type all' from working, but I can add it back later when a sheet can be generated from it.

If it's better to keep old tests and functions and just comment them out, I can revert to a previous commit.

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coveralls commented Mar 28, 2018

Coverage Status

Coverage decreased (-0.7%) to 88.491% when pulling 5e4512a on lookup_sort into 178bfd3 on master.

@aschroed aschroed merged commit 2f867a3 into master Apr 2, 2018
@aschroed aschroed deleted the lookup_sort branch April 2, 2018 17:37
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3 participants