Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Enable EB in LMeX #16

Merged
merged 38 commits into from
Oct 6, 2021
Merged

Enable EB in LMeX #16

merged 38 commits into from
Oct 6, 2021

Commits on Sep 27, 2021

  1. Add missing EB sources to Make.

    @esclapez
    esclapez committed Sep 27, 2021
    Configuration menu
    Copy the full SHA
    01eb16b View commit details
    Browse the repository at this point in the history

  2. Add volFrac to plotfile.

    @esclapez
    esclapez committed Sep 27, 2021
    Configuration menu
    Copy the full SHA
    119330c View commit details
    Browse the repository at this point in the history

  3. Add PeleLM EB source file.

    @esclapez
    esclapez committed Sep 27, 2021
    Configuration menu
    Copy the full SHA
    6ed5e74 View commit details
    Browse the repository at this point in the history

  4. Add a static_cast accessor to ebfactory.

    @esclapez
    esclapez committed Sep 27, 2021
    Configuration menu
    Copy the full SHA
    3dbeac7 View commit details
    Browse the repository at this point in the history

  5. Update AMReX-Hydro calls to pass ebfactory in.

    @esclapez
    esclapez committed Sep 27, 2021
    Configuration menu
    Copy the full SHA
    9202c56 View commit details
    Browse the repository at this point in the history

  6. Missing include for volfrac tagging.

    @esclapez
    esclapez committed Sep 27, 2021
    Configuration menu
    Copy the full SHA
    868c24a View commit details
    Browse the repository at this point in the history

  7. Update diffusion operator for EB.

    @esclapez
    esclapez committed Sep 27, 2021
    Configuration menu
    Copy the full SHA
    e77e1c6 View commit details
    Browse the repository at this point in the history

  8. EB compiles and initialize properly.

    @esclapez
    esclapez committed Sep 27, 2021
    Configuration menu
    Copy the full SHA
    a878c6a View commit details
    Browse the repository at this point in the history

Commits on Sep 28, 2021

  1. Make sure divTau has right Factory.

    @esclapez
    esclapez committed Sep 28, 2021
    Configuration menu
    Copy the full SHA
    72aeb29 View commit details
    Browse the repository at this point in the history

  2. Fix getDiffusivity to not set covered face to 0,0 but huge val.

    @esclapez
    esclapez committed Sep 28, 2021
    Configuration menu
    Copy the full SHA
    8cffcd4 View commit details
    Browse the repository at this point in the history

  3. _OPENMP -> AMREX_USE_OMP

    @esclapez
    esclapez committed Sep 28, 2021
    Configuration menu
    Copy the full SHA
    6997a66 View commit details
    Browse the repository at this point in the history

  4. Remove plot/abort after init.

    @esclapez
    esclapez committed Sep 28, 2021
    Configuration menu
    Copy the full SHA
    e86513c View commit details
    Browse the repository at this point in the history

  5. First pass at updating DiffusionOp for EB. Mostly done.

    @esclapez
    esclapez committed Sep 28, 2021
    Configuration menu
    Copy the full SHA
    74c20fc View commit details
    Browse the repository at this point in the history

  6. Fix divergence of advective flux function for EB.

    @esclapez
    esclapez committed Sep 28, 2021
    Configuration menu
    Copy the full SHA
    795b423 View commit details
    Browse the repository at this point in the history

  7. Minor tweak in PeleLMDiffusion. FluxRedist still need to be implemented.

    @esclapez
    esclapez committed Sep 28, 2021
    Configuration menu
    Copy the full SHA
    297f656 View commit details
    Browse the repository at this point in the history

  8. Re-organive advection to get divergnce and then redistribute when EB. 

    fillBoundary in between req. a temporary.
    @esclapez
    esclapez committed Sep 28, 2021
    Configuration menu
    Copy the full SHA
    e9031b1 View commit details
    Browse the repository at this point in the history

  9. redistribute_AofS function.

    @esclapez
    esclapez committed Sep 28, 2021
    Configuration menu
    Copy the full SHA
    1a7a94c View commit details
    Browse the repository at this point in the history

  10. Add redist schemes for adv/diff, ensure enough ghost cells and declar… 

    …ations.
    @esclapez
    esclapez committed Sep 28, 2021
    Configuration menu
    Copy the full SHA
    6cba3f8 View commit details
    Browse the repository at this point in the history

Commits on Sep 29, 2021

  1. Add ParmParse to control nodal solve MG depth.

    @esclapez
    esclapez committed Sep 29, 2021
    Configuration menu
    Copy the full SHA
    30de616 View commit details
    Browse the repository at this point in the history

  2. Enforce EB-covered to 0 for nodal projection.

    @esclapez
    esclapez committed Sep 29, 2021
    Configuration menu
    Copy the full SHA
    3c3e750 View commit details
    Browse the repository at this point in the history

  3. Add fluxdivegenceRD to handle diffusive flux redistribution. Fix MFSum 

    to exclude EB-covered regions.
    @esclapez
    esclapez committed Sep 29, 2021
    Configuration menu
    Copy the full SHA
    61d9363 View commit details
    Browse the repository at this point in the history

  4. Diffusive flux redistribution function.

    @esclapez
    esclapez committed Sep 29, 2021
    Configuration menu
    Copy the full SHA
    d88f423 View commit details
    Browse the repository at this point in the history

  5. Tedious switch between div/divRD for diffusiob fluxes. Might want to … 

    …simplify later.
    @esclapez
    esclapez committed Sep 29, 2021
    Configuration menu
    Copy the full SHA
    3cb6933 View commit details
    Browse the repository at this point in the history

  6. Accessor to RhoH tower.

    @esclapez
    esclapez committed Sep 29, 2021
    Configuration menu
    Copy the full SHA
    603167d View commit details
    Browse the repository at this point in the history

  7. Declarations.

    @esclapez
    esclapez committed Sep 29, 2021
    Configuration menu
    Copy the full SHA
    69ef81e View commit details
    Browse the repository at this point in the history

Commits on Sep 30, 2021

  1. Add 3D case for EnclosedFlame and a thermo-diffusive CH4/H2 PMF.

    @esclapez
    esclapez committed Sep 30, 2021
    Configuration menu
    Copy the full SHA
    ed6234c View commit details
    Browse the repository at this point in the history

Commits on Oct 1, 2021

  1. Number of ghost cells in EBFactory should be 6 because of StateRedist

    @esclapez
    esclapez committed Oct 1, 2021
    Configuration menu
    Copy the full SHA
    a9bdeec View commit details
    Browse the repository at this point in the history

  2. EBFlag test inst. reaction rate.

    @esclapez
    esclapez committed Oct 1, 2021
    Configuration menu
    Copy the full SHA
    e8b1e9c View commit details
    Browse the repository at this point in the history

  3. Set covered to 0.0 in plotfiles.

    @esclapez
    esclapez committed Oct 1, 2021
    Configuration menu
    Copy the full SHA
    3dcd4a9 View commit details
    Browse the repository at this point in the history

  4. EBFlag in getHGivenT in enthalpy flux.

    @esclapez
    esclapez committed Oct 1, 2021
    Configuration menu
    Copy the full SHA
    5ea600e View commit details
    Browse the repository at this point in the history

  5. Do initial redisitribution and get a covered state.

    @esclapez
    esclapez committed Oct 1, 2021
    Configuration menu
    Copy the full SHA
    3be1299 View commit details
    Browse the repository at this point in the history

  6. Add initial redistribution machinery and first version of covered sta… 

    …te. Need to improve !
    @esclapez
    esclapez committed Oct 1, 2021
    Configuration menu
    Copy the full SHA
    5a45f8c View commit details
    Browse the repository at this point in the history

  7. Less confusing message since we now have EB.

    @esclapez
    esclapez committed Oct 1, 2021
    Configuration menu
    Copy the full SHA
    7e88b03 View commit details
    Browse the repository at this point in the history

  8. StateRedist -> NewStateRedist default and EB-covered declaration.

    @esclapez
    esclapez committed Oct 1, 2021
    Configuration menu
    Copy the full SHA
    181c83c View commit details
    Browse the repository at this point in the history

Commits on Oct 6, 2021

  1. Add EB_FlowPastCylinder case, 2D/3D.

    @esclapez
    esclapez committed Oct 6, 2021
    Configuration menu
    Copy the full SHA
    db34613 View commit details
    Browse the repository at this point in the history

  2. Set EB-covered chi_incr to zero.

    @esclapez
    esclapez committed Oct 6, 2021
    Configuration menu
    Copy the full SHA
    84e72e9 View commit details
    Browse the repository at this point in the history

  3. Merge branch 'development' into feature_EB

    @esclapez
    esclapez committed Oct 6, 2021
    Configuration menu
    Copy the full SHA
    40f302c View commit details
    Browse the repository at this point in the history

  4. Add FlowPastCylinder CI.

    @esclapez
    esclapez committed Oct 6, 2021
    Configuration menu
    Copy the full SHA
    934b354 View commit details
    Browse the repository at this point in the history