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Materials used for a amplicon data analysis in University Leiden 2023

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AdamOss88/Raw-to-Rawr-amplicon-workshop

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Raw-to-rawr workshop

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relevant literature

https://doi.org/10.1016/j.soilbio.2021.108357 - A critical perspective on interpreting amplicon sequencing data in soil ecological research
https://doi.org/10.1186/s40168-017-0237-y - data normalization
doi:10.1093/femsec/fiz045 - Issues and current standards of controls in microbiome research
doi:10.1371/journal.pone.0227434 - bioinformatic pipelines for microbial 16S rRNA
https://doi.org/10.1186/s12864-017-3501-4 - taxonomy assignment

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Materials used for a amplicon data analysis in University Leiden 2023

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